Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq207 105 7e-18 >seq207 Length=10688 Score = 105 bits (116), Expect = 7e-18 Identities = 142/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 ||||| || |||||||| || | | || | | || || ||||||||||| ||| || Sbjct 9999 TCTTTCTGGATGTTGTAGTCAGACAGCGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAAA 10058 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAAC 64371 || | |||||||| || || |||||||| ||||| ||||| | |||| ||||| ||| Sbjct 10059 ATCAAACGCTGCTGATCAGGGGGAATTCCCTCTTTGTCTTG-AATTTTGGCTTTCACATT 10117 Query 64372 CTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTAC 64431 || | || || | ||||| || | ||| | || ||||| ||||| ||||| || Sbjct 10118 TTCGATCGTGTCGGAAGGCTCCACATCCAGAGTAATCGTTTTGCCCGTCAAGGTTTTCAC 10177 Query 64432 GAAAATTTGCATTTT 64446 ||| ||||||||||| Sbjct 10178 GAAGATTTGCATTTT 10192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499437784668240