Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq207 95.1 9e-15 >seq207 Length=10688 Score = 95.1 bits (104), Expect = 9e-15 Identities = 146/207 (71%), Gaps = 1/207 (0%) Strand=Plus/Plus Query 14986 TCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTAT 15045 ||||| || |||||||| || || | || | || || | || |||||||| | Sbjct 9999 TCTTTCTGGATGTTGTAGTCAGACAGCGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAAA 10058 Query 15046 ATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATT 15105 ||||||||||| || || |||||||| || ||||| ||||||| ||| ||| || Sbjct 10059 ATCAAACGCTGCTGATCAGGGGGAATTCCCTCTTTGTCTTGAATTTTGGCTTTCACATTT 10118 Query 15106 TCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACA 15165 || || || ||| | || || || | ||||| ||||| || |||| ||||| || Sbjct 10119 TCGATCGTGTCGGAAGGCTCCACATCCAGAGTAATCGTTTTGCCCGTCAAGGTTTTCACG 10178 Query 15166 AAAATTTGCATATT-TGAAATAAATTT 15191 || |||||||| || | |||| ||||| Sbjct 10179 AAGATTTGCATTTTCTAAAATCAATTT 10205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357247625470610