Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq207 102 7e-17 >seq207 Length=10688 Score = 102 bits (112), Expect = 7e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| |||| || || || || | ||||| || ||||| || || ||||| || ||||| Sbjct 10034 ATCCTCCAGCTGCTTGCCAGCAAAAATCAAACGCTGCTGATCAGGGGGAATTCCCTCTTT 10093 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||||||||| ||| | ||| | |||||||||| ||| || || ||||||| Sbjct 10094 GTCTTGAATTTTGGCTTTCACATTTTCGATCGTGTCGGAAGGCTCCACATCCAGAGTAAT 10153 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||||||| || | ||||| || || |||||||| Sbjct 10154 CGTTTTGCCCGTCAAGGTTTTCACGAAGATTTGCAT 10189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451815923774160