Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq207 113 5e-20 >seq207 Length=10688 Score = 113 bits (124), Expect = 5e-20 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 38235 TTTaaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTC 38294 ||| | ||||||||||| ||||| ||||| | ||||||||||| || || | || || Sbjct 10198 TTTTAGAAAATGCAAATCTTCGTGAAAACCTTGACGGGCAAAACGATTACTCTGGATGTG 10139 Query 38295 GAGGCCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCC 38354 ||| | |||||| | ||| | |||| ||||| | |||||||||||||||||| Sbjct 10138 GAGCCTTCCGACACGATCGAAAATGTGAAAGCCAAAATTCAAGACAAAGAGGGAATTCCC 10079 Query 38355 GCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAAC 38414 | || || ||||| | |||| || ||||| |||||||| || | | || || Sbjct 10078 CCTGATCAGCAGCGTTTGATTTTTGCTGGCAAGCAGCTGGAGGATGGCAGGACGCTGTCT 10019 Query 38415 GACTACAACATCCAAAAGGA 38434 |||||||||||||| || || Sbjct 10018 GACTACAACATCCAGAAAGA 9999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499965565904640