Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq207 105 3e-17 seq29934 93.3 2e-13 >seq207 Length=10688 Score = 105 bits (116), Expect = 3e-17 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| ||||| |||| || ||||| |||||||| ||||| || | || Sbjct 10190 AATGCAAATCTTCGTGAAAACCTTGACGGGCAAAACGATTACTCTGGATGTGGAGCCTTC 10131 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | || ||| | | ||| ||||||||||| || || |||||||| |||||||| Sbjct 10130 CGACACGATCGAAAATGTGAAAGCCAAAATTCAAGACAAAGAGGGAATTCCCCCTGATCA 10071 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || ||||| ||||| | || || || || || ||||| || || || | || || || Sbjct 10070 GCAGCGTTTGATTTTTGCTGGCAAGCAGCTGGAGGATGGCAGGACGCTGTCTGACTACAA 10011 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTA 391259 || | || || || |||||| | ||| Sbjct 10010 CATCCAGAAAGAGAGCACTCTTCACCTTGTA 9980 >seq29934 Length=32083 Score = 93.3 bits (102), Expect = 2e-13 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 451319 GATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGAT 451378 || || || ||||||||||||||||| ||||| ||| | || || || || || |||||| Sbjct 12387 GAGGCCGTTATTACTGTTCCCGCTTACTTCAACGATTCCCAGCGTCAGGCTACAAAAGAT 12446 Query 451379 GCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCT 451438 || || || || ||| | ||||| || || ||||| || ||||| ||||| || || Sbjct 12447 GCTGGTACGATCGCCGGTCTGAATGTGCTGCGTATTATCAACGAACCCACAGCTGCAGCC 12506 Query 451439 CTAGCATATGGACTAG 451454 | || ||||| |||| Sbjct 12507 ATTGCCTATGGTCTAG 12522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974879345735768