Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq30048 82.4 9e-11 >seq30048 Length=11763 Score = 82.4 bits (90), Expect = 9e-11 Identities = 119/165 (72%), Gaps = 6/165 (4%) Strand=Plus/Minus Query 106543 AATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTA 106602 |||||||||||| |||| ||||| || || ||| || || || |||||||||||| | Sbjct 10966 AATCGTCCCCAAGTTCTGCTGGTTGCTTTTCCGGTTACATGCGTCTTTGTAGAGCATGAA 10907 Query 106603 GGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCGGCTGGTAC 106662 || ||||| ||||| |||| |||| || || || ||||| || ||| || Sbjct 10906 AGGAGTCCCTGTCTCAATCTGAGACTGAAGGATGGCGAACCACAACTCCTGGGCGGG--- 10850 Query 106663 AATGGCGTT--GGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAG 106704 ||| | || ||||| | |||||| |||||||||| |||||| Sbjct 10849 AATCGTCTTGCGGCCCCTGCCCTCCCTCTCGTACTTTTCGTAGAG 10805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589736356205040