Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq207 82.4 6e-11 >seq207 Length=10688 Score = 82.4 bits (90), Expect = 6e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 ||||||||||| || || ||||| || ||||| ||||| ||||| || ||| ||| Sbjct 10192 AAAATGCAAATCTTCGTGAAAACCTTGACGGGCAAAACGATTACTCTGGATGTGGAGCCT 10133 Query 28611 TCAGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669 || || ||| | | || | || || |||| || |||||||||||| | ||| || Sbjct 10132 TCCGACACGATCGAAAATGTGAAAGCCAAAATTCAA-GACAAAGAGGGAATTCCCCCTGA 10074 Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729 ||| ||| | | || ||||| ||||| || |||| ||| | || || | || || Sbjct 10073 TCAGCAGCGTTTGATTTTTGCTGGCAAGCAGCTGGAGGATGGCAGGACGCTGTCTGACTA 10014 Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGTA 28763 ||||| || ||||| ||||| ||| | ||| Sbjct 10013 CAACATCCAGAAAGAGAGCACTCTTCACCTTGTA 9980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425232950552334