Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq207 111 1e-19 >seq207 Length=10688 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | ||||| | || || ||||| ||||| || || || || | || Sbjct 10189 ATGCAAATCTTCGTGAAAACCTTGACGGGCAAAACGATTACTCTGGATGTGGAGCCTTCC 10130 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || ||| || || ||||||||||| ||||| || || ||||| Sbjct 10129 GACACGATCGAAAATGTGAAAGCCAAAATTCAAGACAAAGAGGGAATTCCCCCTGATCAG 10070 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || |||||||| ||||| || || |||||||||||| || | |||| || || ||| Sbjct 10069 CAGCGTTTGATTTTTGCTGGCAAGCAGCTGGAGGATGGCAGGACGCTGTCTGACTACAAC 10010 Query 24884 ATTCAAAAGGA 24894 || || || || Sbjct 10009 ATCCAGAAAGA 9999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449711196176880