Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq207 118 7e-22 >seq207 Length=10688 Score = 118 bits (130), Expect = 7e-22 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || |||||||||||||| || |||||||| || || || || | | || |||| || Sbjct 9987 TGAAGAGTGCTCTCTTTCTGGATGTTGTAGTCAGACAGCGTCCTGCCATCCTCCAGCTGC 10046 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || ||||||||||||||||||||||| | || | || |||||||| |||||| Sbjct 10047 TTGCCAGCAAAAATCAAACGCTGCTGATCAGGGGGAATTCCCTCTTTGTCTTGAATTTTG 10106 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 |||| |||| || | |||||| | ||||| || | || |||||||| || || Sbjct 10107 GCTTTC-ACATTTTCGATCGTGTCGGAAGGCTCCACATCCAGAGTAATCGTTTTGCCCGT 10165 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 || ||||| || ||||| ||||| Sbjct 10166 CAAGGTTTTCACGAAGATTTGCAT 10189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328571214472320