Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq207 114 3e-20 >seq207 Length=10688 Score = 114 bits (126), Expect = 3e-20 Identities = 144/195 (74%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || |||||||| ||| |||| ||||| ||| ||||| ||||| Sbjct 10174 AAAACCTTGACGGGCAAAACGATTACTCTGGATGTGGAGCCTTCCGACACGATCGAAAAT 10115 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| |||||||| ||||| |||||| || || || | | || || Sbjct 10114 GTGAAAGCCAAA-ATTCAAGACAAAGAGGGAATTCCCCCTGATCAGCAGCGTTTGATTTT 10056 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || |||||| |||| ||||| ||||| || | || |||||| ||||||||||| Sbjct 10055 TGCTGGCAAGCAGCTGGAGGATGGCAGGACGCTGTCTGACTACAACATCCAGAAAGAGAG 9996 Query 206364 TACTCTTCACCTTGT 206378 |||||||||||||| Sbjct 9995 CACTCTTCACCTTGT 9981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181318900649466