Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq30938 91.5 2e-12 >seq30938 Length=2519 Score = 91.5 bits (100), Expect = 2e-12 Identities = 135/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 263225 TTGATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACC 263284 |||||||||||| ||| || ||||| | ||| |||||| || || |||||| | || Sbjct 315 TTGATATGGCGGTCGATCGAGCGCCTTTTGTTGACCAGTCTCAATCCCTCAACATCCACA 374 Query 263285 TCGCCGACCCGACGGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGC-GTCGCGGC 263343 | | | |||| | || | || | | |||||| | | | |||| | || ||| Sbjct 375 TGGTCAACCCCTCATTCGCCAAGCTCTCCACTATGCACTTCCACGGCTGGCAGGCGGGGC 434 Query 263344 CTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACC 263403 |||||||||||||||| || ||||| |||| ||||||| |||||||| |||| || Sbjct 435 -TCAAGACTGGCATGTATTACCTGCGTACCCAAGCCGCTGCAGACGCCATTAAATTTACT 493 Query 263404 GTCGATCAG 263412 || |||||| Sbjct 494 GTTGATCAG 502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7174614207377652