Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq207 93.3 4e-14 >seq207 Length=10688 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||||||||||| || || || || || | || || | | || || ||||| Sbjct 9987 TGAAGAGTGCTCTCTTTCTGGATGTTGTAGTCAGACAGCGTCCTGCCATCCTCCAGCTGC 10046 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| ||||| || | ||||||||| || | ||| | | ||||||||| ||||| Sbjct 10047 TTGCCAGCAAAAATCAAACGCTGCTGATCAGGGGGAATTCCCTCTTTGTCTTGAATTTTG 10106 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 ||| | | | | ||| ||| | |||||| |||| || || |||| |||||| Sbjct 10107 GCTTTCACATTTTCGATCGTGTCGGAAGGCTCCACATCCAGAGTAATCGTTTTGCCCGTC 10166 Query 39262 AGCGTTTTAACAAAGATTTGCATCTT 39287 | ||||| || ||||||||||| || Sbjct 10167 AAGGTTTTCACGAAGATTTGCATTTT 10192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429372077806298