Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq14827 91.5 3e-13 seq3632 91.5 3e-13 seq21027 87.8 4e-12 seq19703 87.8 4e-12 seq8993 87.8 4e-12 seq5851 87.8 4e-12 seq4878 87.8 4e-12 seq2267 87.8 4e-12 >seq14827 Length=272 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||| | ||||||||||||||||||||||| ||||||| |||||||||| |||||||| Sbjct 197 TTGCCGATTTAGCTCAGTCGGTAGAGCGCCAGCCTTTTAAGCTGGTGGTCGCGGGTTCGA 256 Query 165768 GCCCC 165772 ||||| Sbjct 257 GCCCC 261 >seq3632 Length=23836 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||| | ||||||||||||||||||||||| ||||||| |||||||||| |||||||| Sbjct 3612 TTGCCGATTTAGCTCAGTCGGTAGAGCGCCAGCCTTTTAAGCTGGTGGTCGCGGGTTCGA 3553 Query 165768 GCCCC 165772 ||||| Sbjct 3552 GCCCC 3548 >seq21027 Length=987 Score = 87.8 bits (96), Expect = 4e-12 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 ||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| Sbjct 754 TAGCTCAGTCGGTAGAGCGCCAGCCTTTTAAGCTGGTGGTCGCGGGTTCGAGCCCC 699 Score = 87.8 bits (96), Expect = 4e-12 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 ||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| Sbjct 922 TAGCTCAGTCGGTAGAGCGCCAGCCTTTTAAGCTGGTGGTCGCGGGTTCGAGCCCC 977 >seq19703 Length=2707 Score = 87.8 bits (96), Expect = 4e-12 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 ||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| Sbjct 1 TAGCTCAGTCGGTAGAGCGCCAGCCTTTTAAGCTGGTGGTCGCGGGTTCGAGCCCC 56 Score = 87.8 bits (96), Expect = 4e-12 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 ||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| Sbjct 2644 TAGCTCAGTCGGTAGAGCGCCAGCCTTTTAAGCTGGTGGTCGCGGGTTCGAGCCCC 2699 >seq8993 Length=50066 Score = 87.8 bits (96), Expect = 4e-12 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 ||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| Sbjct 49030 TAGCTCAGTCGGTAGAGCGCCAGCCTTTTAAGCTGGTGGTCGCGGGTTCGAGCCCC 48975 >seq5851 Length=17123 Score = 87.8 bits (96), Expect = 4e-12 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 ||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| Sbjct 3326 TAGCTCAGTCGGTAGAGCGCCAGCCTTTTAAGCTGGTGGTCGCGGGTTCGAGCCCC 3381 >seq4878 Length=3172 Score = 87.8 bits (96), Expect = 4e-12 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 ||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| Sbjct 432 TAGCTCAGTCGGTAGAGCGCCAGCCTTTTAAGCTGGTGGTCGCGGGTTCGAGCCCC 487 >seq2267 Length=34201 Score = 87.8 bits (96), Expect = 4e-12 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCC 165772 ||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| Sbjct 298 TAGCTCAGTCGGTAGAGCGCCAGCCTTTTAAGCTGGTGGTCGCGGGTTCGAGCCCC 243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057534662657240