Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq2111 131 2e-25 >seq2111 Length=7548 Score = 131 bits (144), Expect = 2e-25 Identities = 331/494 (67%), Gaps = 12/494 (2%) Strand=Plus/Minus Query 71521 TCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTC-AGC 71579 || |||| ||||||||| ||||| || || ||||| ||| | ||| | || || ||| Sbjct 5015 TCAGCTAGTCCTTGAACCCCAATCCCTATCGGTCTATGTTTTAGATT-GCTATATCTAGC 4957 Query 71580 TTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATTACTTT 71639 |||| |||||||| || || |||| ||||| ||||| ||||| || | ||||| Sbjct 4956 TTCTTCTATAGGATAGTAGTTCCTATCAATAATATTATTTAGATTATTGGTAACAACTTT 4897 Query 71640 GACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCATC-----TAT-TACAAACACGTT 71693 || |||| |||| ||| | |||||||| | || ||| |||||| ||| Sbjct 4896 AACAACATGTTTTAATTTATTATAATCAAATGTTTTATTGTGTATATCTACAAA-ACGAG 4838 Query 71694 CAAGGCAACA-GATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAA 71752 || | | ||||| |||||||| || |||| ||| | || | | ||||||||||| Sbjct 4837 GGAGAGATAATGATGCTAGATTACATACAGCTATCTCTTCAGGACTTGTATATTGTATAA 4778 Query 71753 TTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGT 71812 |||| || | ||| || | || || | || || |||||| |||||| | | Sbjct 4777 TTTCGCAACATAAATTGCTCGAACGTATACACCCAAGATGTTTTTGATTGCTCTTTCTAT 4718 Query 71813 TACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCG 71872 | || |||||||| || | ||| |||| || || ||||| || || | || || || | Sbjct 4717 TGCAAGCATCCTTGTATAACATATACGGTGTTCCTGTTTCTATTTGTGCTTGTAAGATAG 4658 Query 71873 CTTTCCAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGT 71931 ||| | |||| | ||||||||| | || | ||| | |||||||| ||| | Sbjct 4657 AAAACCATA-AACTCTGCGCCTTTATTGTCTTTCTTCCTCTTCTCTCTCTTTCATATCTT 4599 Query 71932 GTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGA 71991 ||| | | || || |||||||| | | ||| || || ||||| |||||| Sbjct 4598 TCGTATCTTTCTCTAAATTCTTCTCCCCACACTTCCGTTAAACCGGGGCATTCGTTCGGA 4539 Query 71992 CACATCAATGACCA 72005 |||||||| | ||| Sbjct 4538 CACATCAAAGTCCA 4525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670960106504480