Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq4966 111 2e-20 >seq4966 Length=3010 Score = 111 bits (122), Expect = 2e-20 Identities = 172/243 (71%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||| ||||| ||||| ||||| |||||||| || ||| | || | | || ||| Sbjct 1211 CGCGATAATATCCAGGGAATAACCAAACCAGCTATACGACGTTTAGCAAGAAGAGGAGGA 1152 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||| ||| | || || || | |||||||||||| | | |||||||| | ||||| Sbjct 1151 GTCAAACGTATATCCGGTTTAATATATGAAGAGATTAGAGGCGTTTTGAAAGTGTTCCTT 1092 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 | | | ||| | || | || || || || || || | | ||||| || || Sbjct 1091 GAAAATATAATCAAGGACTCAGTCACATACACAGAACATGCAAGGAGAAAGACGGTTACT 1032 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATT-TATGGTTTTGGAAG 16695 | |||||||| |||||| | |||||| | ||||| | || ||| |||||||||||| | Sbjct 1031 GCTATGGATATAGTCTATTCGTTGAAAAGACAAGGAAG-AACATTATATGGTTTTGGAGG 973 Query 16696 TTA 16698 ||| Sbjct 972 TTA 970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79055681374164