Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq19582 98.7 2e-15 seq6729 98.7 2e-15 seq18088 96.9 7e-15 seq4283 96.9 7e-15 >seq19582 Length=3350 Score = 98.7 bits (108), Expect = 2e-15 Identities = 59/62 (95%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 142057 CTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCG 142116 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 1861 CTGTGGCGCAATGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAATCCCG 1920 Query 142117 CC 142118 || Sbjct 1921 CC 1922 >seq6729 Length=1896 Score = 98.7 bits (108), Expect = 2e-15 Identities = 59/62 (95%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 142057 CTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCG 142116 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 701 CTGTGGCGCAATGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAATCCCG 642 Query 142117 CC 142118 || Sbjct 641 CC 640 Score = 96.9 bits (106), Expect = 7e-15 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 142058 TGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCGC 142117 |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1315 TGTGGCGCAATGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAGTCCCGC 1256 Query 142118 C 142118 | Sbjct 1255 C 1255 >seq18088 Length=216 Score = 96.9 bits (106), Expect = 7e-15 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 142058 TGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCGC 142117 |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 69 TGTGGCGCAATGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAGTCCCGC 10 Query 142118 C 142118 | Sbjct 9 C 9 >seq4283 Length=3736 Score = 96.9 bits (106), Expect = 7e-15 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 142058 TGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCGC 142117 |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 886 TGTGGCGCAATGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAGTCCCGC 945 Query 142118 C 142118 | Sbjct 946 C 946 Score = 96.9 bits (106), Expect = 7e-15 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 142058 TGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCGC 142117 |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1806 TGTGGCGCAATGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAGTCCCGC 1865 Query 142118 C 142118 | Sbjct 1866 C 1866 Score = 95.1 bits (104), Expect = 2e-14 Identities = 58/62 (94%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 142057 CTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCG 142116 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 1563 CTGTGGCGCAACGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAATCCCG 1622 Query 142117 CC 142118 || Sbjct 1623 CC 1624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027555664793668