Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq3399 82.4 5e-11 >seq3399 Length=84741 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 21831 AAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCC 21890 |||||||| || ||| | || ||| | ||||| ||||| || ||| | || ||| | Sbjct 40026 AAAATGCAGATTTTTGTGAAGACACTGACGGGGAAAACTATAACCCTCGACGTGGAGCCT 39967 Query 21891 GCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAAC 21950 | || || | | || | ||| || || || ||||||||| | ||| | || Sbjct 39966 TCCGACACTATCGAAAATGTGAAGGCCAAGATCCAGGACAAAGAGGGTATTCCTCCAGAC 39907 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || ||| | || ||||| ||||| || || || || ||| | |||| | |||| ||| Sbjct 39906 CAGCAGCGCCTAATCTTCGCTGGAAAGCAGCTTGATGATGGCAGAACTCTCTCCGACTAC 39847 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTA 22043 || |||||||||||| |||||||| ||||| Sbjct 39846 AACATTCAGAAGGAAAGCACTCTTCACTTGGTA 39814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358031623537192