Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq2256 95.1 1e-14 >seq2256 Length=33050 Score = 95.1 bits (104), Expect = 1e-14 Identities = 92/115 (80%), Gaps = 4/115 (3%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||||||| || ||||||| |||||| || || ||||||||||||||||| | | Sbjct 3346 CCGCCTCTCAGACGTAGCACCAAATGAAGGGTTGATTCTTTCTGAATGTTGTAATCAGAC 3405 Query 33961 AATTGTC--GCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 | ||| || | || ||||| |||||||||||||| ||||| ||||||||||| Sbjct 3406 -AGCGTCCTGC-CATCTTCCAACTGCTTGCCGGCAAAAATCAGACGCTGCTGATC 3458 Score = 91.5 bits (100), Expect = 1e-13 Identities = 110/146 (75%), Gaps = 4/146 (3%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || ||||| || || ||||||| |||||| || ||| ||||||||||||||||| | | Sbjct 3577 CCACCTCTAAGACGGAGCACCAAATGAAGGGTAGACTCTTTCTGAATGTTGTAATCAGAC 3636 Query 33961 AATTGTC--GCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 | ||| || | || |||| |||||||||||||| ||||| ||||||||||| | Sbjct 3637 -AGCGTCCTGC-CATCTTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCAGGAG 3694 Query 34019 GCACGCTCTCTTTGTCCATAATTTTT 34044 | | | ||| |||||| ||| ||| Sbjct 3695 GAATACCCTCCTTGTCCTGAATCTTT 3720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396959092801096