Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq3399 104 3e-17 >seq3399 Length=84741 Score = 104 bits (114), Expect = 3e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || || ||||| || || ||||||||||| ||||| | | || || |||||||| || Sbjct 39827 GTGCTTTCCTTCTGAATGTTGTAGTCGGAGAGAGTTCTGCCATCATCAAGCTGCTTTCCA 39886 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 ||||| || | |||||||||||| | || | | ||| |||||| |||||| ||| Sbjct 39887 GCGAAGATTAGGCGCTGCTGGTCTGGAGGAATACCCTCTTTGTCCTGGATCTTGGCCTTC 39946 Query 46517 AGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTT 46576 | | | | |||||| | ||||| || | || || ||||| |||||||| || Sbjct 39947 ACATTTTCGATAGTGTCGGAAGGCTCCACGTCGAGGGTTATAGTTTTCCCCGTCAGTGTC 40006 Query 46577 TTAACAAAGATTTGCATTTT 46596 || ||||| || |||||||| Sbjct 40007 TTCACAAAAATCTGCATTTT 40026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565087566132960