Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq3399 113 5e-20 seq2256 95.1 1e-14 seq16648 91.5 1e-13 >seq3399 Length=84741 Score = 113 bits (124), Expect = 5e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| || || || || || || ||||| ||||| || ||| ||||||| ||| | Sbjct 40026 AAAATGCAGATTTTTGTGAAGACACTGACGGGGAAAACTATAACCCTCGACGTGGAGCCT 39967 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 |||||| | ||| | || | || |||| ||||||||||| ||||| | ||| Sbjct 39966 TCCGACACTATCGAAAATGTGAAGGCCAAGATCCAGGACAAAGAGGGTATTCCTCCAGAC 39907 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || || | ||| || || ||||| || || | | || ||| ||||||| Sbjct 39906 CAGCAGCGCCTAATCTTCGCTGGAAAGCAGCTTGATGATGGCAGAACTCTCTCCGACTAC 39847 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 ||||| || |||||| || || || ||||| Sbjct 39846 AACATTCAGAAGGAAAGCACTCTTCACTTGGT 39815 >seq2256 Length=33050 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || || ||||| || |||||| | || || ||| | | || | | | Sbjct 3563 TTCGTGAAGACTCTGACTGGCAAGACGATCACCTTAGATGTTGAGCCATCAGATACCATT 3504 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || | || || | ||||| ||||| ||||| | || || ||||| || Sbjct 3503 GAGAATGTGAAGGCGAAGATTCAGGACAAGGAGGGTATTCCTCCTGATCAGCAGCGTCTG 3444 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 |||| || ||||| ||| |||| || | | || || || |||||||| || || Sbjct 3443 ATTTTTGCCGGCAAGCAGTTGGAAGATGGCAGGACGCTGTCTGATTACAACATTCAGAAA 3384 Query 38433 GAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCCGC 38474 ||| | || || ||||||||||| ||| ||||||||||| || Sbjct 3383 GAATCAACCCTTCATTTGGTGCTACGTCTGAGAGGCGGCTGC 3342 >seq16648 Length=236 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/202 (71%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 38271 GGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGAAAA 38329 ||||| ||||||||| | || || ||| | | || | | | | |||| | |||| || Sbjct 1 GGCAAGACCATCACCTTAGATGTTGAGCCATCAGATACCATCGAGAACG-TAAAAGCCAA 59 Query 38330 AATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACA 38389 || | || || ||||||||||| | || || || || ||||||| || ||||| || Sbjct 60 GATTCAGGATAAGGAGGGAATTCCTCCTGATCAGCAACGTCTCATTTTTGCCGGCAAGCA 119 Query 38390 GCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTT 38449 |||||| |||| | || || || |||||||| || || || | || || ||||| Sbjct 120 GCTGGAAGACGGCAGGACGCTGTCTGATTACAACATTCAGAAAGAGTCAACCCTCCATTT 179 Query 38450 GGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||| | ||||| ||| Sbjct 180 GGTGCTCCGTCTTAGAGGTGGC 201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500039328888320