Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq3399 138 7e-28 seq2256 96.9 2e-15 >seq3399 Length=84741 Score = 138 bits (152), Expect = 7e-28 Identities = 159/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| |||||||| ||||||||||| ||||| || || ||| ||||||| Sbjct 39815 ACCAAGTGAAGAGTGCTTTCCTTCTGAATGTTGTAGTCGGAGAGAGTTCTGCCATCATCA 39874 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||| || || ||||| || ||||||||| | || | ||||| ||||| Sbjct 39875 AGCTGCTTTCCAGCGAAGATTAGGCGCTGCTGGTCTGGAGGAATACCCTCTTTGTCCTGG 39934 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || || | | || | || | ||| || |||| |||||| ||||| Sbjct 39935 ATCTTGGCCTTCACATTTTCGATAGTGTCGGAAGGCTCCACGTCGAGGGTTATAGTTTTC 39994 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATATTCG 34986 ||||| || ||||||||||| |||||||| |||| Sbjct 39995 CCCGTCAGTGTCTTCACAAAAATCTGCATTTTCG 40028 >seq2256 Length=33050 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/214 (71%), Gaps = 7/214 (3%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| |||| || ||||||||||||||| || || || || | | |||| ||| Sbjct 3364 ACCAAATGAAGGGTTGATTCTTTCTGAATGTTGTAATCAGACAGCGTCCTGCCATCTTCC 3423 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||| || |||||||| || || || ||||| || | || | ||||||||||| | Sbjct 3424 AACTGCTTGCCGGCAAAAATCAGACGCTGCTGATCAGGAGGAATACCCTCCTTGTCCTGA 3483 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 |||||| || || || || || | || | ||||||||| | ||| || || | Sbjct 3484 ATCTTCGCCTTCAC--ATTCTCAATGGTATCTGATGGCTCAACATCTAAGGTGATCGTCT 3541 Query 34951 TTCCCGTGAGAGTCTTCAC---AAAGATCTGCAT 34981 | || || ||||||||||| ||||||||||| Sbjct 3542 TGCCAGTCAGAGTCTTCACGAANAAGATCTGCAT 3575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324549137235744