Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq3399 86.0 5e-12 >seq3399 Length=84741 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 28542 GATTGTGTAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAA 28601 |||| || |||||||| || ||||| || ||| | ||||| ||||| || ||| ||| Sbjct 40035 GATTTTGCGAAAATGCAGATTTTTGTGAAGACACTGACGGGGAAAACTATAACCCTCGAC 39976 Query 28602 ACGGAACCTTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTG 28661 ||| ||||| || || | | || | ||| || ||| ||||||||||| | Sbjct 39975 GTGGAGCCTTCCGACACTATCGAAAATGTGAAGGCCAAGATCCAGGACAAAGAGGGTATT 39916 Query 28662 CCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATG 28721 || ||| || ||| | || ||||| || || || || | || ||| | |||| | Sbjct 39915 CCTCCAGACCAGCAGCGCCTAATCTTCGCTGGAAAGCAGCTTGATGATGGCAGAACTCTC 39856 Query 28722 GCCGATTATAACATTCAAAAAGAATCTACTCTGCACATGGTA 28763 |||| || |||||||| || ||| ||||| ||| ||||| Sbjct 39855 TCCGACTACAACATTCAGAAGGAAAGCACTCTTCACTTGGTA 39814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425294118710892