Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq3399 111 1e-19 >seq3399 Length=84741 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||||| ||||| |||||||||||||| ||||| || || | | |||| || Sbjct 39815 ACCAAGTGAAGAGTGCTTTCCTTCTGAATGTTGTAGTCGGAGAGAGTTCTGCCATCATCA 39874 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || |||||||| |||||||| || || ||||||||| | || | ||||| ||||| | Sbjct 39875 AGCTGCTTTCCAGCGAAGATTAGGCGCTGCTGGTCTGGAGGAATACCCTCTTTGTCCTGG 39934 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || || || | | || | || | ||| || || | |||||| || || Sbjct 39935 ATCTTGGCCTTCACATTTTCGATAGTGTCGGAAGGCTCCACGTCGAGGGTTATAGTTTTC 39994 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || ||||| ||||| |||||||| Sbjct 39995 CCCGTCAGTGTCTTCACAAAAATCTGCAT 40023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325608061654412