Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq2111 87.8 2e-12 seq2256 84.2 2e-11 >seq2111 Length=7548 Score = 87.8 bits (96), Expect = 2e-12 Identities = 187/277 (68%), Gaps = 8/277 (3%) Strand=Plus/Minus Query 151168 TTCAATAGGGTAGAAATTGCGATCAATAATTTTATTCAAACTATTCACTACATGTTTGAC 151227 ||| ||||| ||| | || | ||||||||| ||||| | | |||| ||| ||| || Sbjct 4953 TTCTATAGGATAGTAGTTCCTATCAATAATATTATTTAGATTATTGGTAACAACTTTAAC 4894 Query 151228 CACAGTGTGCAATAGTTGAAAATCAAAAGTATCATTATTGATATATTTATT--GACGGC- 151284 ||| | ||| | | ||||||| || | ||| | |||| | | || || Sbjct 4893 AACATGTTTTAATTTATTATAATCAAATGTTTTATTGTGTATATCTACAAAACGAGGGAG 4834 Query 151285 ----AATCGACGCTAGATTACATACGGCAGTTTCGTCGGGCGCGCAATATTGTACTATTT 151340 ||| || |||||||||||||| || | || || || |||||||| |||| Sbjct 4833 AGATAAT-GATGCTAGATTACATACAGCTATCTCTTCAGGACTTGTATATTGTATAATTT 4775 Query 151341 CCGCACACAAATTGCTGCATTTTATCAATCCGCAATTACTTTGATTGCTTTTGCGGTTGC 151400 | ||| |||||||| | ||| | || || |||||||||| || | |||| Sbjct 4774 CGCAACATAAATTGCTCGAACGTATACACCCAAGATGTTTTTGATTGCTCTTTCTATTGC 4715 Query 151401 AAGCGTCCTTGTATAACATGTACGGTGTGCCGGTTTC 151437 |||| |||||||||||||| |||||||| || ||||| Sbjct 4714 AAGCATCCTTGTATAACATATACGGTGTTCCTGTTTC 4678 >seq2256 Length=33050 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 ||| |||| | ||| | || ||||||| || |||||||| || ||||||||||| Sbjct 3345 GCCGCCTCTCAGACGTAGCACCAAATGAAGGGTTGATTCTTTCTGAATGTTGTAATCAGA 3404 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 || || || ||||| | || || || ||| | |||||||| |||||||| ||||| Sbjct 3405 CAGCGTCCTGCCATCTTCCAACTGCTTGCCGGCAAAAATCAGACGCTGCTGATCAGGAGG 3464 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 || || || ||||| ||| || || | | || | || |||| || || || Sbjct 3465 AATACCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCAATGGTATCTGATGGCTCAAC 3524 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAA 137402 || | || | ||||||||| |||| || || ||||| Sbjct 3525 ATCTAAGGTGATCGTCTTGCCAGTCAGAGTCTTCACGAA 3563 Score = 82.4 bits (90), Expect = 7e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 ||| |||| | ||| | || ||||||| ||||| ||||| || ||||||||||| Sbjct 3576 GCCACCTCTAAGACGGAGCACCAAATGAAGGGTAGACTCTTTCTGAATGTTGTAATCAGA 3635 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 || || || ||||| || || || || ||| | |||||||| |||||||| ||||| Sbjct 3636 CAGCGTCCTGCCATCTTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCAGGAGG 3695 Query 137304 TATGCCTTCTTTGTC 137318 || || || ||||| Sbjct 3696 AATACCCTCCTTGTC 3710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488413632033600