Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq3399 104 2e-17 seq2256 89.7 5e-13 seq16648 84.2 2e-11 >seq3399 Length=84741 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || |||||||| || ||| | || || ||||||||||| ||||| || || || ||| Sbjct 39869 TCATCAAGCTGCTTTCCAGCGAAGATTAGGCGCTGCTGGTCTGGAGGAATACCCTCTTTG 39928 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||| | | || | ||||||| ||||||||||||| ||| | Sbjct 39929 TCCTGGATCTTGGCCTTCACATTTTCGATAGTGTCGGAAGGCTCCACGTCGAGGGTTATA 39988 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || ||||| || || || ||||||||||| Sbjct 39989 GTTTTCCCCGTCAGTGTCTTCACAAAAATCTGCAT 40023 >seq2256 Length=33050 Score = 89.7 bits (98), Expect = 5e-13 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||| ||||||||||| || |||||||| || ||| || || ||| Sbjct 3598 AAATGAAGGGTAGACTCTTTCTGAATGTTGTAATCAGACAGCGTCCTGCCATCTTCCAGC 3657 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| || |||| || |||||||| || ||||| || || |||||||| ||| Sbjct 3658 TGCTTGCCGGCAAAAATCAGACGCTGCTGATCAGGAGGAATACCCTCCTTGTCCTGAATC 3717 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGA 133623 ||| ||| | | ||||| || || | ||||| || || | ||||| Sbjct 3718 TTTGCCTTCACATTCTCAATGGTATCTGATGGCTCAACATCTAAGGTGA 3766 >seq16648 Length=236 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||| ||||||||||| || |||||||| || ||| ||| || ||| Sbjct 179 AAATGGAGGGTTGACTCTTTCTGAATGTTGTAATCAGACAGCGTCCTGCCGTCTTCCAGC 120 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| || ||||||| || ||||| || ||||| || || ||||| || ||| Sbjct 119 TGCTTGCCGGCAAAAATGAGACGTTGCTGATCAGGAGGAATTCCCTCCTTATCCTGAATC 60 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || || | | ||| | || || | ||||| || || | ||||| ||| ||||| Sbjct 59 TTGGCTTTTACGTTCTCGATGGTATCTGATGGCTCAACATCTAAGGTGATGGTCTTGCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483291799159520