Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq2256 111 1e-19 seq16648 87.8 1e-12 >seq2256 Length=33050 Score = 111 bits (122), Expect = 1e-19 Identities = 165/231 (71%), Gaps = 5/231 (2%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||||| ||||| ||||||||| || || ||||| || ||||||||||| || Sbjct 3346 CCGCCTCTCAGACGTAGCACCAAATGAAGGGTTGATTCTTTCTGAATGTTGTAATCAGAC 3405 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | || ||||| || || ||||||||||||| |||||||||||| | || Sbjct 3406 AGCGTCCTGCCATCTTCCAACTGCTTGCCGGCAAAAATCAGACGCTGCTGATCAGGAGGA 3465 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| || ||||| ||| ||| ||| |||| || | ||| || || || || Sbjct 3466 ATACCCTCCTTGTCCTGAATCTTCGCCTTC-ACATTCTCAATGGTATCTGATGGCTCAAC 3524 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC---AAAGATCTGCAT 33749 || | |||||||| || || || | || || || ||||||||||| Sbjct 3525 ATCTAAGGTGATCGTCTTGCCAGTCAGAGTCTTCACGAANAAGATCTGCAT 3575 Score = 98.7 bits (108), Expect = 7e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| | ||| | ||||||||| || || |||||| || ||||||||||| || Sbjct 3577 CCACCTCTAAGACGGAGCACCAAATGAAGGGTAGACTCTTTCTGAATGTTGTAATCAGAC 3636 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | || |||| || || ||||||||||||| |||||||||||| | || Sbjct 3637 AGCGTCCTGCCATCTTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCAGGAGGA 3696 Query 33643 ACACCTTCTTTGTC 33656 | ||| || ||||| Sbjct 3697 ATACCCTCCTTGTC 3710 >seq16648 Length=236 Score = 87.8 bits (96), Expect = 1e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| | ||| | ||||||||| || || |||||| || ||||||||||| || Sbjct 200 CCACCTCTAAGACGGAGCACCAAATGGAGGGTTGACTCTTTCTGAATGTTGTAATCAGAC 141 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATC 33635 || || | |||| |||| || || ||||||||||| | ||| |||||||| Sbjct 140 AGCGTCCTGCCGTCTTCCAGCTGCTTGCCGGCAAAAATGAGACGTTGCTGATC 88 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328618478204160