Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2256 91.5 1e-13 seq3399 87.8 2e-12 >seq2256 Length=33050 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | |||| ||||| ||||||||||| || || || | |||||| Sbjct 3364 ACCAAATGAAGGGTTGATTCTTTCTGAATGTTGTAATCAGACAGCGTCCTGCCATCTTCC 3423 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 | ||| || |||| | | || |||||||| ||||| ||||| || || || || || | Sbjct 3424 AACTGCTTGCCGGCAAAAATCAGACGCTGCTGATCAGGAGGAATACCCTCCTTGTCCTGA 3483 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || |||| | || | ||||| | ||||| || || | || | ||| || Sbjct 3484 ATCTTCGCCTTCACATTCTCAATGGTATCTGATGGCTCAACATCTAAGGTGATCGTCTTG 3543 Query 132095 CCAGTCAGAGTTTTTATGAAA---ATCTGCATG 132124 ||||||||||| || | ||| ||||||||| Sbjct 3544 CCAGTCAGAGTCTTCACGAANAAGATCTGCATG 3576 >seq3399 Length=84741 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 131933 TCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAG 131992 || || ||||||||||||||| | || | ||| || ||||| || || | || Sbjct 39833 TCCTTCTGAATGTTGTAGTCGGAGAGAGTTCTGCCATCATCAAGCTGCTTTCCAGCGAAG 39892 Query 131993 ATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGT 132052 ||||| ||||| || |||||||| || || ||||| || || || |||| | | Sbjct 39893 ATTAGGCGCTGCTGGTCTGGAGGAATACCCTCTTTGTCCTGGATCTTGGCCTTCACATTT 39952 Query 132053 TCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATG 132112 || | ||| |||| |||||||| |||| || | ||||| || ||||| || || | Sbjct 39953 TCGATAGTGTCGGAAGGCTCCACGTCGAGGGTTATAGTTTTCCCCGTCAGTGTCTTCACA 40012 Query 132113 AAAATCTGCAT 132123 ||||||||||| Sbjct 40013 AAAATCTGCAT 40023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476484016301280