Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq3399 118 1e-21 seq2256 93.3 4e-14 >seq3399 Length=84741 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | || || ||||| ||||||||||| |||| | |||| | || || Sbjct 39815 ACCAAGTGAAGAGTGCTTTCCTTCTGAATGTTGTAGTCGGAGAGAGTTCTGCCATCATCA 39874 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 |||||||| || || || || | ||||||||||| | ||||| | ||| |||||| | Sbjct 39875 AGCTGCTTTCCAGCGAAGATTAGGCGCTGCTGGTCTGGAGGAATACCCTCTTTGTCCTGG 39934 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||||| | || | | |||||| | ||||| || | || || ||||| Sbjct 39935 ATCTTGGCCTTCACATTTTCGATAGTGTCGGAAGGCTCCACGTCGAGGGTTATAGTTTTC 39994 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCATT 35737 ||||||| || |||||||| ||||||||| Sbjct 39995 CCCGTCAGTGTCTTCACAAAAATCTGCATT 40024 >seq2256 Length=33050 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||||||| | ||| ||| || |||||||||||||| | || || | | || || Sbjct 3594 CACCAAATGAAGGGTAGACTCTTTCTGAATGTTGTAATCAGACAGCGTCCTGCCATCTTC 3653 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||||||| || ||||| |||| |||||||| || | ||||| | |||||||||| Sbjct 3654 CAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCAGGAGGAATACCCTCCTTGTCCTG 3713 Query 35647 GATCTTTTGCTTCA 35660 |||||| ||||| Sbjct 3714 AATCTTTGCCTTCA 3727 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/213 (69%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||||||| | || || || |||||||||||||| | || || | | || || Sbjct 3363 CACCAAATGAAGGGTTGATTCTTTCTGAATGTTGTAATCAGACAGCGTCCTGCCATCTTC 3422 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 || |||||| || ||||| |||| |||||||| || | ||||| | |||||||||| Sbjct 3423 CAACTGCTTGCCGGCAAAAATCAGACGCTGCTGATCAGGAGGAATACCCTCCTTGTCCTG 3482 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 ||||| ||||| | | | | || || | || || || | |||||||| || Sbjct 3483 AATCTTCGCCTTCACATTCTCAATGGTATCTGATGGCTCAACATCTAAGGTGATCGTCTT 3542 Query 35707 ACCCGTCAAAGTTTTCAC---AAATATCTGCAT 35736 || |||| ||| ||||| || |||||||| Sbjct 3543 GCCAGTCAGAGTCTTCACGAANAAGATCTGCAT 3575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450673305727840