Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq19714 147 2e-30 >seq19714 Length=2676 Score = 147 bits (162), Expect = 2e-30 Identities = 351/523 (67%), Gaps = 22/523 (4%) Strand=Plus/Minus Query 19319 TTAAACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTTATGGGCCACCGGGTTGTG 19378 || || |||| |||| |||||||| || | || | ||||| || || || | Sbjct 1114 TTGAAGAATTAGGATTAAAACATGTAAAGGGTTTATTATTGTATGGTCCGCCAGGAACAG 1055 Query 19379 GAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA---CAAAACAACCTCCCAAAA 19435 ||||||| |||| || | || | | ||| ||||| ||| | | || || | Sbjct 1054 GAAAAACTCTAATAGCACGCCAAATAGGGAAAGCACTTAATGCAAGAGAGCCA---AAGA 998 Query 19436 TTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGAC 19495 | ||||| ||||| ||||| ||||||||||| ||||| ||||| |||||||||||| || Sbjct 997 TAGTAAACGGTCCCGAAATATTAAATAAATACGTAGGACAATCTGAAGAAAATGTAAGAG 938 Query 19496 GTTTGTTTGCTGACGCTGAAGAAGAACAAA-AACGTTTAGGGCGCAAAAGTTC---TTTG 19551 || ||| || || ||||||||| ||| || | | ||||| | ||| ||| Sbjct 937 CATTATTTAAGGAGGCAGAAGAAGAAGAAAGAAAG--AAAGGCGCTGA--TTCAGGTTTA 882 Query 19552 CACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGG------TTCTGGT 19605 || || || ||| | ||||| || || ||||| ||||| |||||||| | |||| Sbjct 881 CATATAATTATATTTGATGAGTTAGATGCAATTTGTAAACAAAGAGGAGCGAATCCTGGA 822 Query 19606 GTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAAC 19665 | | || ||| ||| ||||||| |||||| | | ||||| | || |||||||| Sbjct 821 GGAGCAGGTGTAACAGACTCTGTTGTAAATCAATTATTATCAAAGATTGATGGTGTTAAT 762 Query 19666 CAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGC- 19724 | |||||||| ||| | || || ||||| ||| || | || ||||||| || Sbjct 761 GGTTTAAATAATATATTATTAATAGGAATGACAAATCGATTAGATCTAATAGATGAAGCT 702 Query 19725 CTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGG 19784 ||| ||| |||| ||| | || || | || ||||| | |||| ||||| || Sbjct 701 CTTCTTA-GACCTGGTAGATTTGAGGTTTTAATTGAAATAGGCCTACCAGATGAGAAGGG 643 Query 19785 ACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAA 19827 | | | |||| ||| ||||||||| | | |||| |||| Sbjct 642 AAGATTACAAATACTAACAATACATACACAAGCTATGCAACAA 600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397352590394740