Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2111 84.2 3e-11 >seq2111 Length=7548 Score = 84.2 bits (92), Expect = 3e-11 Identities = 264/404 (65%), Gaps = 10/404 (2%) Strand=Plus/Plus Query 104909 CAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAAT 104968 |||| || || || ||||| || ||| | ||||| || || || || |||||| ||| Sbjct 4672 CAAATAGAAACAGGAACACCGTATATGTTATACAAGGATGCTTGCAATAGAAAGAGCAAT 4731 Query 104969 CAAAAGAAT-TTGGGTGTGATCAAGAGTTC---CAATCTCTGTACAGAAATCTTGGAATT 105024 ||||| || |||||||| | |||| |||| | ||| ||||| | ||| Sbjct 4732 CAAAAACATCTTGGGTGTATAC----GTTCGAGCAATTTATGTTGCGAAATTATACAATA 4787 Query 105025 TACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGT 105084 |||| || |||| ||||| ||||| || |||||| | ||||||| | ||| Sbjct 4788 TACAAGTCCTGAAGAGATAGCTGTATGTAATCTAGCATCATTATCTCTCCCTCGTTTTGT 4847 Query 105085 GGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCAC 105144 ||| | | | || |||||||||||| | ||| | | | ||| ||| ||| || Sbjct 4848 AGATATACACAATAAAACATTTGATTATAATAAATTAAAACATGTTGTTAAAGTTGTTAC 4907 Query 105145 CAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCG-TAAAT 105203 ||| || ||||| | |||||||||| || | || || | || ||| | || | Sbjct 4908 CAATAATCTAAATAATATTATTGATAGGAACTACTATCCTATAGAAGAAGCTAGATATAG 4967 Query 105204 CTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTC 105263 | ||| | | ||| | || || || | || ||||| || || || ||||| || | | Sbjct 4968 C-AATCTAAAACATAGACCGATAGGGATTGGGGTTCAAGGACTAGCTGATGTCTTTCTAC 5026 Query 105264 TTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAAT 105307 || ||| | | || ||||| || |||| | ||||| ||| Sbjct 5027 TTCTTCGTCTTCCTTTCGATTCAAACAAAGCAAGAGAAATTAAT 5070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583105156855520