Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq7778 93.3 5e-14 >seq7778 Length=1485 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 59878 AAGAGAAGGCTGGTCTGTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAACAAAAAGCAG 59937 ||||||| | | ||| ||| |||||| ||| ||| || || | ||||||| Sbjct 1278 AAGAGAAAGATCATCTATTCAATGCCATTCAGAACATCCCGGCGGTGGCAGTGAAAGCAG 1219 Query 59938 AATGGGCCATGCAGTGGATGAGTCCTGGAGCATCATTTGCACAACGTCTCATAGCTTTTG 59997 |||||| | ||||||| | | ||||||||| ||||||| |||||||| Sbjct 1218 CATGGGCGGCGAAGTGGATAAACAAAACAAAATCATTTGCTGAACGTCTTGTAGCTTTTT 1159 Query 59998 CATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGC 60057 || || |||||||| | || || || || |||||||| ||||||||||||||||| | Sbjct 1158 GTTGTGTAGAAGGAATTCTTTTTTCAGGTTCTTTCTGTGCAATTTTCTGGCTCAAAAAAC 1099 Query 60058 GTGGCCTCATGCCGGG 60073 | || || ||||| || Sbjct 1098 GAGGACTTATGCCAGG 1083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548378426157120