Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq3157 82.4 1e-10 >seq3157 Length=25461 Score = 82.4 bits (90), Expect = 1e-10 Identities = 87/114 (76%), Gaps = 3/114 (3%) Strand=Plus/Minus Query 137112 TTCTTATCTGGTGGATTAAGTGAAGAAGAAGCATCTCTATATCTAAATGAGATGAATATT 137171 ||||||||||| || | ||||||||||||||| || || || ||| ||||||| Sbjct 1112 TTCTTATCTGGGGGGCAATCTGAAGAAGAAGCATCATTAAATTTAGATGCTATGAATAG- 1054 Query 137172 CTAAGTGTTGATAAACCATGGAATGTATCATTCTCATATGGTAGAGCACTACAA 137225 || || | || | || ||||| |||| ||||||||||||||||| |||||| Sbjct 1053 --AATTGGTAATCATCCTTGGAAGCTATCCTTCTCATATGGTAGAGCCCTACAA 1002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631258703651680