Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2111 192 8e-44 seq372 95.1 2e-14 >seq2111 Length=7548 Score = 192 bits (212), Expect = 8e-44 Identities = 384/563 (68%), Gaps = 12/563 (2%) Strand=Plus/Minus Query 77433 TCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGA 77492 ||||| || || ||||| | ||| ||||| | ||| || ||| | | | ||| Sbjct 5084 TCGAATATATTTTTATTAATTTCTCTTGCTTTGTTTGAATCGAAAGGAAGACGAAGAAGT 5025 Query 77493 ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAA 77552 | |||| |||| |||| ||| ||||| ||||| || || ||||||||| | |||| | Sbjct 5024 AGAAAGACATCAGCTAGTCCTTGAACCCCAATCCCTATCGGTCTATGTTTTAGATTGCTA 4965 Query 77553 ATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACA 77612 | |||||||| |||||||| || || | || ||||| ||||| ||||| | | Sbjct 4964 TATCTAGCTTCTTCTATAGGATAGTAGTTCCTATCAATAATATTATTTAGATTATTGGTA 4905 Query 77613 ACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATC---TATA---ACA 77666 || |||||||| || | |||| |||| | |||||||| || || |||| ||| Sbjct 4904 ACAACTTTAACAACATGTTTTAATTTATTATAATCAAATGTTTTATTGTGTATATCTACA 4845 Query 77667 AACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATAT 77726 || | || || |||||||||||||| || |||| ||| | || | | |||| Sbjct 4844 AAACGAGGGAGAGATAATGATGCTAGATTACATACAGCTATCTCTTCAGGACTTGTATAT 4785 Query 77727 TGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTC 77786 ||||| || ||| ||||| ||| || | ||| || |||| || ||| |||||| Sbjct 4784 TGTATAATTTCGCAACATAAATTGCTCGAACGTATACACCCAAGATGTTTTTGATTGCTC 4725 Query 77787 TTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCG 77846 ||| ||||||| | ||||| || | ||| |||| || || ||||| || |||| || Sbjct 4724 TTTCTATTGCAAGCATCCTTGTATAACATATACGGTGTTCCTGTTTCTATTTGTGCTTGT 4665 Query 77847 ATAATAGATTTCCAGACGACTCT-AGCTTTTATCATAGATTTGTATCGCCTCTCTCTTTC 77905 | ||||| ||| | ||||| || ||||| | | | || ||||||||||| Sbjct 4664 AAGATAGAAAACCATA-AACTCTGCGCCTTTATTGTCTTTCTTCCTCTTCTCTCTCTTTC 4606 Query 77906 ATA--TTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCAT 77963 ||| || |||| | | | |||||| |||||||| || || || || |||||| Sbjct 4605 ATATCTTTCGTATCTTTC--TCTAAATTCTTCTCCCCACACTTCCGTTAAACCGGGGCAT 4548 Query 77964 TCATTTGGGCACATCAATGACCA 77986 || || || |||||||| | ||| Sbjct 4547 TCGTTCGGACACATCAAAGTCCA 4525 >seq372 Length=768 Score = 95.1 bits (104), Expect = 2e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 48549 CTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTA 48608 || |||||||| ||||| | ||||||||||||||| | | |||| || | ||| | Sbjct 47 CTTGCAGCAAAGAATGCGAGTACATGTTTAATAAAGTGTCTTTCATTATCATCGAGTCGA 106 Query 48609 TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCT 48668 ||| ||||| | |||| || |||||||||||||||||||| || || || ||| Sbjct 107 GCCCAATCATTTAAATCTGCCTGCATGTCTACTTCTTCAGCTGTCCAGAAGGAAGCTTCT 166 Query 48669 GCTTTTTTATACATATTCCATA 48690 ||||| || ||||| | ||||| Sbjct 167 GCTTTCTTGTACATCTCCCATA 188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694483427630720