Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq2256 93.3 1e-13 >seq2256 Length=33050 Score = 93.3 bits (102), Expect = 1e-13 Identities = 150/215 (70%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | |||||| || || ||||| || ||||||||||| | | || || |||||| Sbjct 3361 AGCACCAAATGAAGGGTTGATTCTTTCTGAATGTTGTAATCAGACAGCGTCCTGCCATCT 3420 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || ||||| || || || | |||||| || | | || || ||||| || Sbjct 3421 TCCAACTGCTTGCCGGCAAAAATCAGACGCTGCTGATCAGGAGGAATACCCTCCTTGTCC 3480 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || ||| |||| | | | ||||| ||| || || | || || || Sbjct 3481 TGAATCTTCGCCTTCACATTCTCAATGGTATCTGATGGCTCAACATCTAAGGTGATCGTC 3540 Query 152073 TTGCCCGTGAGAGTCTTCACG---AAGACCTGCAT 152104 ||||| || |||||||||||| |||| |||||| Sbjct 3541 TTGCCAGTCAGAGTCTTCACGAANAAGATCTGCAT 3575 Score = 84.2 bits (92), Expect = 5e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || || | ||| || | |||||| ||||||||||| || ||||||||||| | | || Sbjct 3583 CTAAGACGGAGCACCAAATGAAGGGTAGACTCTTTCTGAATGTTGTAATCAGACAGCGTC 3642 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || |||||||| || || ||||| || || || | |||||| || | | || || Sbjct 3643 CTGCCATCTTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCAGGAGGAATACCC 3702 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGA 152047 ||||| || ||||| ||| || ||| |||| | | | ||||| Sbjct 3703 TCCTTGTCCTGAATCTTTGCCTTCACATTCTCAATGGTATCTGA 3746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153505205492508