Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq3399 147 5e-30 seq2256 134 3e-26 >seq3399 Length=84741 Score = 147 bits (162), Expect = 5e-30 Identities = 161/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 282890 TACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTC 282949 ||||| || | |||||||| || || ||||||||||| | || || | |||||| || Sbjct 39814 TACCAAGTGAAGAGTGCTTTCCTTCTGAATGTTGTAGTCGGAGAGAGTTCTGCCATCATC 39873 Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 || || || || || ||||| | || || ||||| ||||||||||| ||||| || Sbjct 39874 AAGCTGCTTTCCAGCGAAGATTAGGCGCTGCTGGTCTGGAGGAATACCCTCTTTGTCCTG 39933 Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 |||||| || || || | ||||||||||| |||| || || ||||| || || || || Sbjct 39934 GATCTTGGCCTTCACATTTTCGATAGTGTCGGAAGGCTCCACGTCGAGGGTTATAGTTTT 39993 Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103 ||||||| ||||| || || |||||||||||| Sbjct 39994 CCCCGTCAGTGTCTTCACAAAAATCTGCATTTTC 40027 >seq2256 Length=33050 Score = 134 bits (148), Expect = 3e-26 Identities = 168/230 (73%), Gaps = 3/230 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || | ||| || || |||| ||| | || |||||| || |||||||| |||| Sbjct 3346 CCGCCTCTCAGACGTAGCACCAAATGAAGGGTTGATTCTTTCTGAATGTTGTAATCAGAC 3405 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| | |||||| || | || || |||||||| |||| ||| || || ||| ||| Sbjct 3406 AGCGTCCTGCCATCTTCCAACTGCTTGCCGGCAAAAATCAGACGCTGCTGATCAGGAGGA 3465 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||||||||| || ||||| || || || | || || || || || | || || Sbjct 3466 ATACCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCAATGGTATCTGATGGCTCAACA 3525 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAAT---ATCTGCAT 283099 || | ||||||||||| || |||| |||||| ||||| |||||||| Sbjct 3526 TCTAAGGTGATCGTCTTGCCAGTCAGAGTCTTCACGAANAAGATCTGCAT 3575 Score = 105 bits (116), Expect = 1e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | || || || |||| ||| | || ||||| || |||||||| |||| Sbjct 3577 CCACCTCTAAGACGGAGCACCAAATGAAGGGTAGACTCTTTCTGAATGTTGTAATCAGAC 3636 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| | |||||| || || || || |||||||| |||| ||| || || ||| ||| Sbjct 3637 AGCGTCCTGCCATCTTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCAGGAGGA 3696 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||||||||| || |||||||| || || | || || || || || | || || Sbjct 3697 ATACCCTCCTTGTCCTGAATCTTTGCCTTCACATTCTCAATGGTATCTGATGGCTCAACA 3756 Query 283053 TCGAGAGTGAT 283063 || | ||||| Sbjct 3757 TCTAAGGTGAT 3767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046452894585592