Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20praecox_20[genbank_20GCA_5F000499445.1_202013-11-08] 21,348 sequences; 60,083,328 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2256 109 4e-19 >seq2256 Length=33050 Score = 109 bits (120), Expect = 4e-19 Identities = 163/231 (71%), Gaps = 3/231 (1%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || |||||||| | | ||||| ||||| || || || || ||||||||||| | Sbjct 3346 CCGCCTCTCAGACGTAGCACCAAATGAAGGGTTGATTCTTTCTGAATGTTGTAATCAGAC 3405 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || | | || |||| |||||| |||||||| |||| |||||||||||| | ||| Sbjct 3406 AGCGTCCTGCCATCTTCCAACTGCTTGCCGGCAAAAATCAGACGCTGCTGATCAGGAGGA 3465 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | ||| ||||| ||| |||||| ||||| | | ||||| || | | || || Sbjct 3466 ATACCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCAATGGTATCTGATGGCTCAACA 3525 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG---AAGATTTGCATG 44338 || | || |||||||| || || || ||||||||| ||||| |||||| Sbjct 3526 TCTAAGGTGATCGTCTTGCCAGTCAGAGTCTTCACGAANAAGATCTGCATG 3576 Score = 86.0 bits (94), Expect = 5e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || | | ||||| ||||| || ||| || || ||||||||||| Sbjct 3573 CATGCCACCTCTAAGACGGAGCACCAAATGAAGGGTAGACTCTTTCTGAATGTTGTAATC 3632 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || | | || ||||||||||| |||||||| |||| |||||||||||| | Sbjct 3633 AGACAGCGTCCTGCCATCTTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCAGG 3692 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCA 44261 ||| | ||| ||||| ||| ||||| ||||| Sbjct 3693 AGGAATACCCTCCTTGTCCTGAATCTTTGCCTTCA 3727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359896738147716