Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1943 140 4e-28 >seq1943 Length=707543 Score = 140 bits (154), Expect = 4e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| || | ||||| ||||| ||||| |||||||| | ||||||| ||||||| Sbjct 224027 ACCAAGTGAAGGGTGCTTTCCTTCTGAATGTTGTAATCCGAAAGAGTCCTGCCGTCATCA 224086 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 || ||||| || ||||| || || |||||||| || | ||| | || ||||||||| | Sbjct 224087 AGTTGCTTTCCTGCGAAGATAAGACGCTGCTGATCAGGCGGGATGCCCTCCTTGTCTTGG 224146 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 ||||| || | | | | |||||| | |||||| |||| ||||||||||| Sbjct 224147 ATTTTCGCCTTCACATTTTCGATGGTGTCGGAAGGTTCCACGTCGAGAGTGATGGTTTTT 224206 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 ||||| || ||||| || |||||||||||||| Sbjct 224207 CCCGTAAGGGTCTTCACGAAGATTTGCATTTT 224238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571784255886200