Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq1943 82.4 5e-11 >seq1943 Length=707543 Score = 82.4 bits (90), Expect = 5e-11 Identities = 141/201 (70%), Gaps = 14/201 (7%) Strand=Plus/Plus Query 33179 TCTTTTTGTATATTGTAATCAGACAAATTGAGT--TG--GTCATCCAATTGCTTTCCACT 33234 || || || || |||||||| || | |||| || |||||| | ||||||||| Sbjct 224045 TCCTTCTGAATGTTGTAATCCGAAA----GAGTCCTGCCGTCATCAAGTTGCTTTCCTGC 224100 Query 33235 AAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC---GCTAATCGCCTGTTT 33291 || || | ||| ||||| || | || ||||| || || || | | |||||| | Sbjct 224101 GAAGATAAGACGCTGCTGATCAGGCGGGATGCCCTCCTTGTCTTGGATTTTCGCCT---T 224157 Query 33292 TACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGT 33351 || ||| || |||||| |||| ||||| ||||| || |||||||||||||| || Sbjct 224158 CACATTTTCGATGGTGTCGGAAGGTTCCACGTCGAGAGTGATGGTTTTTCCCGTAAGGGT 224217 Query 33352 TTTTACGAAAATTTGCATGTT 33372 || ||||| |||||||| || Sbjct 224218 CTTCACGAAGATTTGCATTTT 224238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318759475999170