Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2794 107 5e-18 >seq2794 Length=11877 Score = 107 bits (118), Expect = 5e-18 Identities = 132/178 (74%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 364060 GCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAG 364119 || || |||||| |||| ||| || ||| |||| || ||| | ||| |||||| Sbjct 3015 GCGCTGTACGAAGAGTACGAACGGGCGGGGAAGGGGCGGCGGACGGTGGGCGCGCAGAAG 2956 Query 364120 CTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAA 364179 || ||||| ||||| || | ||||||| || || || || || || ||| |||||||| Sbjct 2955 CTGTGGTTCGCCATTCTGCAGGCGCAGATCGAAACGGGGACCCCGTACATGCTGTACAAA 2896 Query 364180 GATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAAC 364236 || |||||||||| ||| ||||||||||||||| || || | | |||| |||||| Sbjct 2895 GACGCGTGCAACCGGAAGAGCAACCAGCAGCACCTGGGCACGCTGC-GCAGCAGCAAC 2839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303275698148030