Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 5e-12 >seq1 Length=1462819 Score = 86.0 bits (94), Expect = 5e-12 Identities = 216/315 (69%), Gaps = 15/315 (5%) Strand=Plus/Plus Query 50979 ATCCACGTTAAACTTACGCTTACAGCCCGCGTAGTTCATATACCTGATTCTGCCAAAAAT 51038 ||| ||| ||| |||||| | || || || ||||||| || | |||| | ||||| || Sbjct 749592 ATCAACGGAAAATTTACGCATGCAACCAGCCAAGTTCATGTATCGGATTTTACCAAAGAT 749651 Query 51039 TTTGCGTTCTTTG-AACGGCCTG-TCGTGCACACC-GCAA-ATTGACCACATACAACCCA 51094 | ||||| ||| |||| |||||||| || |||| | | ||||||||| |||| Sbjct 749652 TGGCCGTTCGGCCCAAC--CCTGATCGTGCACCCCTGCAACACT--CCACATACATCCCA 749707 Query 51095 CATAATTGTTAGGATCGCGACCATCCACGCTGTAA--TGATCGTTTAGAAATATGGCATA 51152 || || || ||| || |||| || || | ||||| ||||||| || Sbjct 749708 CAACTCCATTGGGGTCGGTTCCGTCCAG--TGAAAATTTGTCGTTGAGAAATAAAGCTGT 749765 Query 51153 ACCCAATGCCATGTCTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCG 51212 | | || ||||| || || ||||| |||| |||||||| ||||||||||| || Sbjct 749766 AGTGAGAGCGATGTCGGCTGACGGTGTCCACTCCAGGATTTTCTTTGCCCAGTACATCCG 749825 Query 51213 CATGTAACCGTGCATCTT-GCCCTCGCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATT 51271 | | ||||||||||||| ||| | || |||||| || |||| |||||| | || Sbjct 749826 AAGGAAACCGTGCATCTTCGCCGTGTGGAC-CAGCTGCAACTGCGCCGCGTTCCAGAGTT 749884 Query 51272 CGTCGTGAGT-TTGG 51285 | || || || |||| Sbjct 749885 CATCATGTGTCTTGG 749899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433303363271975