Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq599 91.5 3e-13 seq1 91.5 3e-13 >seq599 Length=377263 Score = 91.5 bits (100), Expect = 3e-13 Identities = 58/62 (94%), Gaps = 1/62 (2%) Strand=Plus/Minus Query 142058 TGTGGCGCAAT-GGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCG 142116 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 297289 TGTGGCGCAATCGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAGTCCCG 297230 Query 142117 CC 142118 || Sbjct 297229 CC 297228 >seq1 Length=1462819 Score = 91.5 bits (100), Expect = 3e-13 Identities = 58/62 (94%), Gaps = 1/62 (2%) Strand=Plus/Minus Query 142058 TGTGGCGCAAT-GGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCG 142116 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 435207 TGTGGCGCAATCGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAGTCCCG 435148 Query 142117 CC 142118 || Sbjct 435147 CC 435146 Score = 87.8 bits (96), Expect = 4e-12 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142060 TGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCGC 142117 |||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 434646 TGGCGCAACGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAGTCCCGC 434589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027775365873265