Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq18 96.9 3e-15 >seq18 Length=557087 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| |||||||||||||| || || | ||| || || || || || Sbjct 280021 GTGGACTCTTTCTGAATGTTGTAATCAGACAGCGTCCTTCCATCCTCCAGCTGCTTGCCG 280080 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| |||||||| || || ||||||||||| || ||||| ||||||| || Sbjct 280081 GCGAAGATAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTCCTGAATCTTTGCCTTC 280140 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | | || || || | || | || || || || || ||| Sbjct 280141 ACATTCTCAATGGTGTCTGATGGCTCCACATCGAGAGTGATGGTCTTCCCCGTGAGGGTT 280200 Query 114366 TTTACAAAAATCTGCATG 114383 || ||||| ||||||||| Sbjct 280201 TTCACAAAGATCTGCATG 280218 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| |||||||||||||| || || | ||| || || || || || Sbjct 280249 GTGGACTCTTTCTGAATGTTGTAATCAGACAGCGTCCTTCCATCCTCCAGCTGCTTGCCG 280308 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| |||||||| || || ||||||||||| || ||||| ||||||| || Sbjct 280309 GCGAAGATAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTCCTGAATCTTTGCCTTC 280368 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | | || || || | || | || || || || || ||| Sbjct 280369 ACATTCTCAATGGTGTCTGATGGCTCCACATCGAGAGTGATGGTCTTCCCCGTGAGGGTT 280428 Query 114366 TTTACAAAAATCTGCATG 114383 || ||||| ||||||||| Sbjct 280429 TTCACAAAGATCTGCATG 280446 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| |||||||||||||| || || | ||| || || || || || Sbjct 280477 GTGGACTCTTTCTGAATGTTGTAATCAGACAGCGTCCTTCCATCCTCCAGCTGCTTGCCG 280536 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| |||||||| || || ||||||||||| || ||||| ||||||| || Sbjct 280537 GCGAAGATAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTCCTGAATCTTTGCCTTC 280596 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | ||| | ||| || | | || || || | || | || || || || ||||| Sbjct 280597 ACATTTTCGATGGTATCTGATGGCTCCACATCGAGAGTGATGGTCTTCCCTGTAAGAGTC 280656 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 280657 TTCACAAAGATCTGCAT 280673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420110513389980