Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= NC_009904.1 Length=142072 Score E Sequences producing significant alignments: (Bits) Value seq2017 84.2 2e-11 seq1977 84.2 2e-11 seq1976 84.2 2e-11 seq1418 84.2 2e-11 seq657 84.2 2e-11 >seq2017 Length=150101 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 136992 GGTCTCGAACCTGCGACCGTTCGGTTATGAGCCGAATGCTCTGACCAACTGAGCTAAACG 137051 ||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||| | | Sbjct 31406 GGTCTCGAACCGGCGACCTTTCGGTTATTAGCCGAATGCTCTAACCAACTGAGCTATAGG 31465 Query 137052 TCCT 137055 ||| Sbjct 31466 ACCT 31469 >seq1977 Length=211496 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 136992 GGTCTCGAACCTGCGACCGTTCGGTTATGAGCCGAATGCTCTGACCAACTGAGCTAAACG 137051 ||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||| | | Sbjct 117148 GGTCTCGAACCGGCGACCTTTCGGTTATTAGCCGAATGCTCTAACCAACTGAGCTATAGG 117207 Query 137052 TCCT 137055 ||| Sbjct 117208 ACCT 117211 >seq1976 Length=214655 Score = 84.2 bits (92), Expect = 2e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 136992 GGTCTCGAACCTGCGACCGTTCGGTTATGAGCCGAATGCTCTGACCAACTGAGCTAAACG 137051 ||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||| | | Sbjct 189810 GGTCTCGAACCGGCGACCTTTCGGTTATTAGCCGAATGCTCTAACCAACTGAGCTATAGG 189869 Query 137052 TCCT 137055 ||| Sbjct 189870 ACCT 189873 >seq1418 Length=1048118 Score = 84.2 bits (92), Expect = 2e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 136992 GGTCTCGAACCTGCGACCGTTCGGTTATGAGCCGAATGCTCTGACCAACTGAGCTA 137047 ||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||| Sbjct 596461 GGTCTCGAACCGGCGACCTTTCGGTTATTAGCCGAATGCTCTAACCAACTGAGCTA 596516 >seq657 Length=2788 Score = 84.2 bits (92), Expect = 2e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 136992 GGTCTCGAACCTGCGACCGTTCGGTTATGAGCCGAATGCTCTGACCAACTGAGCTA 137047 ||||||||||| |||||| ||||||||| ||||||||||||| ||||||||||||| Sbjct 660 GGTCTCGAACCGGCGACCTTTCGGTTATTAGCCGAATGCTCTAACCAACTGAGCTA 715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454475896828800