Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2794 102 1e-16 >seq2794 Length=11877 Score = 102 bits (112), Expect = 1e-16 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGC-TTCTCAGATAGTACATGC 203897 || |||||||||||||| ||||||| | | || |||||| | | | |||||||| | Sbjct 1360 CTGGTCCACCGTGAACTTGATGGCGTCCGCAGC-CGCCTGCGTGCGGAAGTAGTACATCC 1418 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTT-GCTCACGTTG 203956 | ||||| || ||| | |||| |||| | |||||||| || ||||| || | | || Sbjct 1419 CCGTCTTCAGCCCCGCCCGCCAGCCGTGGAAGTGCATGGTGGAGAGTTTGGCGTAAG-TG 1477 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCG 204016 |||| ||||||| |||||||| ||||| ||||| | ||| || |||| || || Sbjct 1478 GGGTTCACCATGTGGATGTTCAGCGACTGCGACTGGTCCACGAAGGGGGCCCTGTCCACG 1537 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA 204065 ||||| | | ||| | | ||| || |||||||| ||| || ||| Sbjct 1538 GCCATGTCCACGATGCTTCTTTGCTTTATTTCCCACACTGTCCTGTACA 1586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795108832512400