Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2794 122 2e-22 >seq2794 Length=11877 Score = 122 bits (134), Expect = 2e-22 Identities = 137/181 (76%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 222022 GTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCT 222081 |||||| | ||| | | |||||||||||| ||||||||||||||| | || || ||||| Sbjct 3354 GTTGTCGTAGACGCGTTTCATGAAGAGGTCTGGGATCCACAGCGCCGGGAAAAGGTCTCT 3413 Query 222082 GGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGC 222141 | ||| ||||| ||||| ||| |||| | |||| ||||||||||||||| || Sbjct 3414 CGCGCGCATTTCCTCTTTGCCGTGGTTCTTCCGAATGTCCAGAAACTCAAAAATGTCTGC 3473 Query 222142 GTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGT-CGCTTGTTGCCACCCTGATCCA 222200 ||||||||||||| || || || || || || | |||||| ||| ||||| |||| Sbjct 3474 ATGCCACGGCTCCACGTACACCGCGAG-GCTCCCCTTCCGCTTGCCGCCCCCCTGGTCCA 3532 Query 222201 C 222201 | Sbjct 3533 C 3533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928790636737600