Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= NC_019521.1 Length=219372 Score E Sequences producing significant alignments: (Bits) Value seq4390 145 1e-29 >seq4390 Length=5277 Score = 145 bits (160), Expect = 1e-29 Identities = 397/602 (66%), Gaps = 7/602 (1%) Strand=Plus/Minus Query 139439 AAAGGAATTATTTTAGCAGGTGGGTCTGGGACCCGCTTGCATCCATTGACTATCAGTGTT 139498 ||||| |||||| | || ||||| || || ||||| || ||||| | ||| | Sbjct 4230 AAAGGTATTATTCTTGCGGGTGGCTCAGGTACCCGTCTGTATCCACTTACTCGAGCTACA 4171 Query 139499 TCGAAACAGTTATTACCTGTATACGATAAACCAATGATTTACTATCCATTGACAACTCTT 139558 ||||||||| | | || || || |||||||| |||||||||||||| || ||||| | Sbjct 4170 TCGAAACAGCTGATGCCGGTTTATGATAAACCCATGATTTACTATCCTCTGTCAACTTTG 4111 Query 139559 ATCGAAGCTGGTATAAACGAAATACTTATAATATCAACACCACAGGATA-GAAATTCTTT 139617 || || ||||| || || || | || || ||||| ||||||||| | |||| Sbjct 4110 ATGTTGGCGGGTATTAAGGATATTTTGATTATTTCAACGCCACAGGATTTGCCGCGCTTT 4051 Query 139618 CGAGAACTTACTAGGTAACGGTTCACAATTTGGTGTTAGAATAGAATACGCTGTTCAAGA 139677 || |||| || | ||||| ||||||| | ||| | || || | || Sbjct 4050 A-AGGACTTGCTCTTGGATGGTTCCGAATTTGGGATCAGACTTTCCTATGCGGAACAGCC 3992 Query 139678 AAAACCTAATGGTTTAGCACAAGCTTTCGTTATCGGTGAAGAATTCATAGGTAAATCTAA 139737 | || |||| | || || || || |||||||||| || || || ||| | || Sbjct 3991 TAGTCCAGATGGCCTTGCTCAGGCCTTTCTTATCGGTGAGGATTTTATTGGTGACGATAG 3932 Query 139738 AGTAGCTCTGATTTTAGGTGACAACATTTTCCATGCTTCTAATAT-AGATAGATTACTTA 139796 || ||| | || || |||||||| |||| || | | | | | || |||| || Sbjct 3931 CGTTGCTTTAATCTTGGGTGACAATATTTATCACGGTCCAGGTTTGAGCAAGATG-CTCC 3873 Query 139797 TGGAAGCTAATATGTCTGATAAAAATACGA---TATTTGCATATCGTGTAAATGATCCTC 139853 || || | | || || | ||| | |||| || | || || ||||| Sbjct 3872 AAAAAACTGTTTCGAAAGAAAAGGGTGCGACTGTTTTTGGTTACCAAGTGAAGGATCCAG 3813 Query 139854 AGAGATATGGTGTAGTTGAATTCGATGAATATGATAACGCTGTTTCGATCGAAGAAAAAC 139913 | | | |||||| || ||||| |||||| || || ||| |||| || |||||||||| Sbjct 3812 AACGCTTTGGTGTTGTAGAATTTGATGAAAATATGAATGCTATTTCCATAGAAGAAAAAC 3753 Query 139914 CTTTGAATCCTAAATCTAATTACGCAGTACCAGGCTTATATTTCTATAATAACGATGTTA 139973 | | || | || || || ||||| |||| | ||||||||| ||||||||||| Sbjct 3752 CAGAGTGTCATCGCTCCAACTATGCAGTGACAGGACTGTATTTCTATGATAACGATGTTG 3693 Query 139974 TCGAAGTAGCTAAGACTATCAAACCTTCAGCTCGTGGAGAATACGAAATATCAGATATTA 140033 ||||| | || |||| ||||||||| |||||||| || | ||||| ||||| | | Sbjct 3692 TCGAAATTGCCAAGAGTATCAAACCAAGTGCTCGTGGTGAGTTAGAAATCACAGATGTCA 3633 Query 140034 AC 140035 || Sbjct 3632 AC 3631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701821472648800