Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= NC_020079.1 Length=147737 Score E Sequences producing significant alignments: (Bits) Value seq4390 114 1e-20 >seq4390 Length=5277 Score = 114 bits (126), Expect = 1e-20 Identities = 466/723 (64%), Gaps = 21/723 (3%) Strand=Plus/Plus Query 38694 ATTGACCAGCTTCCATCAGACTGGCGTGTGTTCCTGTGTCAAGCCAAGTAAATCCTCGTC 38753 ||||| ||||||| || || | || |||||||| |||||||||| ||| || |||| Sbjct 3528 ATTGAGAGGCTTCCAACAAGCTTTCATGGGTTCCTGTATCAAGCCAAGCAAAGCCACGTC 3587 Query 38754 CGAGAACTTCCACTTGTAACTTCCTGTCTTCTAGGTA-GCTGCGATTGATATCAGTGATC 38812 | | ||||| || ||| || | || | ||| || | |||| ||| ||||| Sbjct 3588 CCATGACTTCGACAGATAAATTACCACGATCCAAGTAAGCCTTG-TTGACATCTGTGATT 3646 Query 38813 TCCAGTTCTCCACGCGCGGAAGGGGTTACTTCTAATG-CACGTTGAATAACAGAGTTATC 38871 || | || ||||| || || | | | || || || || | |||| |||||| Sbjct 3647 TCTAACTCACCACGAGCACTTGGTTTGA-TACTCTTGGCAATTTCGACAACATCGTTATC 3705 Query 38872 ATAGAAATACAAACCTGTGACAGCATAATCTGATTTAGGATTTTCAGGTTTCTCTTCAAT 38931 ||||||||||| ||||| || ||||| | || | || || ||||| ||||| || Sbjct 3706 ATAGAAATACAGTCCTGTCACTGCATAGTTGGAGCGATGACACTCTGGTTTTTCTTCTAT 3765 Query 38932 AGAAATAGCTTGACGATTACTCCCAAATTCAACCACACCGAATCGTTCAGGATCTTTCAC 38991 |||||||| | ||| ||||||| || ||||| || ||||| ||||| ||||| Sbjct 3766 GGAAATAGCATTCATATTTTCATCAAATTCTACAACACCAAAGCGTTCTGGATCCTTCAC 3825 Query 38992 CAAATACCCGAAAATACAAGCTCCGCCCCAAACATCTACCATCTCACTGGCGTTAATCAG 39051 || || |||| | || || | | | || | | || || Sbjct 3826 TTGGTAACCAAAAACAGTCGCACCC---------TTTTCTTTCGAAACAGTTTTTTGGAG 3876 Query 39052 TAGTTTACCAAAGCTTTGTCCG--AAGAATAGGTTGTCACCTAAAATAAGAGCAACAGAG 39109 | || | || | | | ||| | |||| |||||||| || || | |||||| Sbjct 3877 CATCTTGCTCAAACCTGGACCGTGATAAATA--TTGTCACCCAAGATTAAAGCAACGCTA 3934 Query 39110 TCTTCTCCGATAAAATCTTTACCTATGATGAAAGCTTCCGCAAGACCTCGTGG-CTCGGA 39168 || || || |||||||| | ||| || | || || | ||||| || ||| || || Sbjct 3935 TCGTCACCAATAAAATCCTCACCGATAAGAAAGGCCTGAGCAAGGCCATCTGGACTAGGC 3994 Query 39169 TTGGATTGCGTAAGTGAGTTTTATCCCAAACATAGACCCATCTCCGAGAAGATACTCAAA 39228 | | || || | ||| | |||||||| || ||||| ||| | | || ||| Sbjct 3995 T-GTTCCGCATAGGAAAGTCTGATCCCAAATTCGGAACCATCCAAGAGCAAGTCCTTAAA 4053 Query 39229 GTCTTCCTGATCACCTGGTGTGGTGATGATTAAAATATCCTTAATGTCAGCCAACATCAA 39288 | | ||| ||| || | || || |||||||||||||| | ||||||||||| Sbjct 4054 GCGCGGCAAATCCTGTGGCGTTGAAATAATCAAAATATCCTTAATACCCGCCAACATCAA 4113 Query 39289 TACCGATAAAGGGTAGTAGATCATGGGTTTGTCATACACAGGGAGCAATTGCTT-GCTCA 39347 || | ||| ||||| ||||||||||| ||||| || || | || || || | | Sbjct 4114 AGTTGACAGAGGATAGTAAATCATGGGTTTATCATAAACCGGCATCAGCTGTTTCGATGT 4173 Query 39348 CACTGCGTGTTACCGGATGAAGGCGGGTTCCACTTCCTCCCGCCAAAATAATACCTTTCA 39407 || || || | |||| || ||||| || || ||||| | |||||||||||||| Sbjct 4174 AGCT-CGAGTAAGTGGATACAGACGGGTACCTGAGCCACCCGCAAGAATAATACCTTTCA 4232 Query 39408 TAA 39410 ||| Sbjct 4233 TAA 4235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472602839739800