Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq284 91.5 4e-13 >seq284 Length=407498 Score = 91.5 bits (100), Expect = 4e-13 Identities = 166/241 (69%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 302629 GCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT 302688 || |||||||| | ||| | | |||||||||||| || ||||| ||||| | ||| || Sbjct 240814 GCAGTATCAATGATACCTTCTCTACCACCCATAGCGTGAAAGAACAGCTCCTGCGGCAGT 240755 Query 302689 AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTG 302748 || || | | || | ||| || || || | ||||| || | ||||| ||| Sbjct 240754 AGGCCTGTGAGATAGCTGTGCTCGACAAAGCCTCTGCTTTCGGGAGAGTAATCGAATTTG 240695 Query 302749 GTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTC 302808 | || || ||||| | || || | ||||| | || ||||||||||| || || ||| Sbjct 240694 CTGAAATGCGGCAGTGACCGATTATTGAAGCCGAAGGGAATACGCTTTCCCTCTACATTC 240635 Query 302809 TGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATC--ACTGCCCTTGGAGCCAG 302866 ||||| |||| ||| | || || | || |||| | |||| || ||||| || |||| Sbjct 240634 TGCTGACCCACGCATGCCATAATTT--GAGATATGTTAATCGTGCTCCCCTTCGATCCAG 240577 Query 302867 C 302867 | Sbjct 240576 C 240576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471729629002105