Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq18 84.2 2e-11 >seq18 Length=557087 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/233 (68%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 137179 ACATGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAA 137238 ||||| || |||| | |||| || || |||| || || ||||| || ||||||||| Sbjct 279986 ACATG-CCACCTCTCAGGCGCAGCACCAAGTGAAGGGTGGACTCTTTCTGAATGTTGTAA 280044 Query 137239 TCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCG 137298 || || || || || || || || || || || |||| ||||| |||||||| Sbjct 280045 TCAGACAGCGTCCTTCCATCCTCCAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGATCA 280104 Query 137299 GGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGT 137358 ||||| ||||| || ||||| ||| ||| || | | || | ||||||| || Sbjct 280105 GGAGGAATGCCCTCCTTGTCCTGAATCTTTGCCTTCACATTCTCAATGGTGTCTGATGGC 280164 Query 137359 TCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || || || | ||| | ||||| || || | ||||| || || || ||||| Sbjct 280165 TCCACATCGAGAGTGATGGTCTTCCCCGTGAGGGTTTTCACAAAGATCTGCAT 280217 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 ||| |||| | |||| || || |||| || || ||||| || ||||||||||| Sbjct 280218 GCCACCTCTCAGGCGCAGCACCAAGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGA 280277 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 || || || || || || || || || || |||| ||||| |||||||| ||||| Sbjct 280278 CAGCGTCCTTCCATCCTCCAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGATCAGGAGG 280337 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 ||||| || ||||| ||| ||| || | | || | ||||||| || || || Sbjct 280338 AATGCCCTCCTTGTCCTGAATCTTTGCCTTCACATTCTCAATGGTGTCTGATGGCTCCAC 280397 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | ||| | ||||| || || | ||||| || || || ||||| Sbjct 280398 ATCGAGAGTGATGGTCTTCCCCGTGAGGGTTTTCACAAAGATCTGCAT 280445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488515511778000