Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq18 134 1e-26 seq2794 122 8e-23 seq2762 87.8 2e-12 >seq18 Length=557087 Score = 134 bits (148), Expect = 1e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||||||||||||||| || |||||||| || ||| ||||| ||| Sbjct 280012 AAGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGACAGCGTCCTTCCATCCTCCAGC 280071 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| ||| | || || |||||||| || ||||| ||||| |||||||| ||| Sbjct 280072 TGCTTGCCGGCGAAGATAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTCCTGAATC 280131 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 ||| ||| | | ||||| ||||| | |||||||| |||| |||| ||| || || Sbjct 280132 TTTGCCTTCACATTCTCAATGGTGTCTGATGGCTCCACATCGAGAGTGATGGTCTTCCCC 280191 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 || || ||||| || || ||||||||| Sbjct 280192 GTGAGGGTTTTCACAAAGATCTGCATG 280218 Score = 134 bits (148), Expect = 1e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||||||||||||||| || |||||||| || ||| ||||| ||| Sbjct 280240 AAGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGACAGCGTCCTTCCATCCTCCAGC 280299 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| ||| | || || |||||||| || ||||| ||||| |||||||| ||| Sbjct 280300 TGCTTGCCGGCGAAGATAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTCCTGAATC 280359 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 ||| ||| | | ||||| ||||| | |||||||| |||| |||| ||| || || Sbjct 280360 TTTGCCTTCACATTCTCAATGGTGTCTGATGGCTCCACATCGAGAGTGATGGTCTTCCCC 280419 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 || || ||||| || || ||||||||| Sbjct 280420 GTGAGGGTTTTCACAAAGATCTGCATG 280446 Score = 120 bits (132), Expect = 3e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||||||||||||||| || |||||||| || ||| ||||| ||| Sbjct 280468 AAGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGACAGCGTCCTTCCATCCTCCAGC 280527 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| ||| | || || |||||||| || ||||| ||||| |||||||| ||| Sbjct 280528 TGCTTGCCGGCGAAGATAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTCCTGAATC 280587 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 ||| ||| | | || | || || | |||||||| |||| |||| ||| || || Sbjct 280588 TTTGCCTTCACATTTTCGATGGTATCTGATGGCTCCACATCGAGAGTGATGGTCTTCCCT 280647 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| || || || |||||||| Sbjct 280648 GTAAGAGTCTTCACAAAGATCTGCAT 280673 >seq2794 Length=11877 Score = 122 bits (134), Expect = 8e-23 Identities = 350/522 (67%), Gaps = 30/522 (6%) Strand=Plus/Plus Query 148626 CGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTA 148685 |||||| ||| ||| |||||||| |||||||| ||||| | ||| ||||||| ||| Sbjct 2570 CGCAGCAGCAGAAAGGCGTCGGCGAGGCCCTGGACGCCGAGGCCGATGGGCCTGTGGCGG 2629 Query 148686 ATGTTGGAGAGGCGCGCGCTCTCGAGCGGA-TAGTGGTTGCGGTCGATGATCTTGT-CAA 148743 | |||| | |||||| ||| | ||| ||| ||||||||||||||| |||| ||| Sbjct 2630 AAGTTGCTGCTGCGCGC-CTCGGGGACGGGGTAGAAGTTGCGGTCGATGATGTTGTTCAA 2688 Query 148744 GATTGCGCACCACCAC-----CTTTGTAATTCTGCGCAGC-AATTCAAAATCGTACTTGT 148797 | |||||| || || | | || | | | || || || || ||| Sbjct 2689 G-TTGCGCGTCATGACGGCCACGACGCGCTTGAGGCCCTCGAAGTCGAAGGCGCGCTTCG 2747 Query 148798 CA---TCTACGATGCATCGGTTCACGGCGATA--GAGGCTAGATTGCACACGGCCGTCTC 148852 | || |||| || ||| | |||| | ||||| | ||||| |||||| ||| Sbjct 2748 CCGCGTCCACGAAGCG-CGG----CAGCGACACGGAGGCCAAGTTGCAGACGGCCACCTC 2802 Query 148853 ATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCAC 148912 || ||| | || ||| |||| ||| ||||| ||||||| | | ||||| Sbjct 2803 CTCGGGGCTGGTGAACTGCACGACTTCGCAGCACAAGTTGCTGCTGCGCAGCGTGCCCAG 2862 Query 148913 GTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGT 148972 || || || |||||||| | |||||||||||| ||||||||||||||||| || || Sbjct 2863 GTGCTGCTGGTTGCTCTTCCGGTTGCACGCGTCTTTGTACAGCATGTACGGGGTCCCCGT 2922 Query 148973 TTCCACCTGCGTTTCCACTAT---GAACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTC 149029 ||| | ||||| | || || ||||| ||| | |||||||| ||| | || | Sbjct 2923 TTCGATCTGCGCCTGCAGAATGGCGAACC---ACAGCTTCTGCGCGCCCACCGTCCGC-C 2978 Query 149030 GTAGC-GACCCTCCTGCTCGTATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAAT 149088 | | ||| || | ||||| |||||| ||||||| || |||| | | | Sbjct 2979 GCCCCTTCCCCGCCCGTTCGTACTCTTCGTACAGCGCCTCGAACTCCGCGCCCCACCGCT 3038 Query 149089 -CGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCAC 149129 |||| || |||||||||| | ||||||||| |||| |||| Sbjct 3039 CCGTC-AGCCCGGGGCACTCGCACGGGCACATCAGCGTCCAC 3079 >seq2762 Length=14237 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/160 (73%), Gaps = 6/160 (4%) Strand=Plus/Minus Query 120348 GCGCTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTT 120407 ||||| ||| ||||||||||| ||||| || ||||| |||||||||| || |||||| Sbjct 1475 GCGCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTTTTGCCCTGCAGCGAAATCAA 1416 Query 120408 GTTCATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCA---ACTGTAC 120464 || ||| |||||||| |||||| ||| ||| || | ||| | |||| Sbjct 1415 GTCCATGAACTCGAAGGGGTTGGCAGCGCCGAAGGCCTTGGCGCCGCCGAGGCACTG--- 1359 Query 120465 GAGCAGTCGGTCCGCTACAAACTCAATGTACTCGCACATG 120504 ||||| |||||||| || ||||| | ||||| | |||| Sbjct 1358 CAGCAGGCGGTCCGCCACGAACTCGACGTACTGGGCCATG 1319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483392610524600